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PD Dr. Cécile Gouttefangeas:

Current Research projects


Characterisation of the interactions between immune cells and tumors in cancer patients

  1. Characterization of T-cell epitopes derived from newly-identified tumor associated antigens and antibody responses to tumor antigens (Figure 1)

  2. Identification of HLA-ligands and T-cell epitopes in SCLC 

  3. Subsets of CD4+ and CD8+ T cells, immunosuppressive cell subsets within tumors and in the peripheral blood (Figures 2)

  4. Effect of standard therapies on the immune system of cancer 

Monitoring of antigen-specific T-cells in experimental peptide vaccination against cancer

  1. CD4+ and CD8+ T-cell induction during peptide-based vaccination: phenotype and (multi)function

  2. Correlation between immune response and clinical course (Figures 3 & 4)

Adjuvant Research

We are analyzing the effects of single adjuvants and combinations thereof on immune cells. 

  1. In vitro effects of TLR ligands and combination thereof on immune cells

  2. Immunomonitoring of anti-tumor vaccines applied in combination with various adjuvants

Immune monitoring platform

Our laboratory is equipped to provide high quality tools for immune monitoring (Figure 5). We are also interested in developing new antibody panels and assays for addressing the phenotype and function of immune cell subsets. 

  1. A new assay based on the detection of conformational changes of integrins after T-cell activation (Figure 6)

  2. International immunoguiding activities within the CIP group

Figure 1 (click into figure to enlarge)

Figure 1: 
VITAL assay to assess the cytotoxic potential of tumor antigen specific CD8+ clones against peptide-loaded targets or trasnfectants expressing the relevant tumor antigen (Polychromatic flow cytometry, Laske et al, Cancer Immunol Res. 2013;190-200)

Figure 2 (click into figure to enlarge)

Figure 2:
Frequency of cells expressing inhibitor checkpoint receptors within non Treg CD4+ T cells or CD8+ T-cells within TILs (RCC_T), autologous PBMCs (RCC_P), and age and gender-matched healthy donor PBMCs (HD_P). Mean and SD are shown; * p≤0.05 | ** p≤0.01 | *** p≤0.001). Zelba et al. Cancer Immunol Res 2019, 11:1891-1899

Figure 3 (click into figure to enlarge)

Figure 3:
Induction of vaccine-specific CD4+ T cells in one patient with prostate carcinoma after peptide-based vaccination (IFN-γ ELISPOT assay with HLA-class II-binding peptides).

Figure 4 (click into figure to enlarge)

Figure 4:
Polyfunctional analysis of vaccine-specific T cells in a cohort of 18 patients with prostate carcinoma. Bars represent means + 95% CI of specific CD4+ T cells expressing each of the five activation markers or all possible combinations thereof. One example of an intracellular cytokine staining is shown.

Figure 5 (click into figure to enlarge)

Figure 5:



Figure 6 (click into figure to enlarge)

Figure 6
Assessment of adhesion properties as a T-cell monitoring tool. Following T-cell receptor-mediated stimulation, integrin (LFA-1) activation occurs rapidly through an “inside-out” signaling process which leads to an affinity increase and a clustering of membrane-bound integrins. These can be detected using fluorescent multimers of their ligand ICAM-1 (for detection of antigen-specific CD8+ T cells) or using the monoclonal antibody m24 (for detection of antigen-specific CD4+ and CD8+ T cells).